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Gene name:
(example: mec-7 or R13A5.9)
Define your scoring scheme
Leave entry blank to use default scores.
New scores can be decimals or integers, but should be within the range of 0-10 (0 means to exclude the feature).
Final score is the sum of all feature scores.
Score
Feature
Default
same
C. elegans
expression
0-1.68
same
C. elegans
phenotype
0-1.34
same
C. elegans
biological process
0.34-1.96
co-express in
C. elegans
microarray data
-0.69-1.58
same
D. melanogaster
expression
0-1.10
same
D. melanogaster
phenotype
0-1.14
same
D. melanogaster
biological process
0-1.58
co-express in
D. melanogaster
microarray data
-0.36-0.78
Score
Feature
Default
same
S. cerevisiae
subcellular localization
0-0.92
same
S. cerevisiae
phenotype
0-1.76
same
S. cerevisiae
biological process
0-0.72
co-express in
S. cerevisiae
microarray data
-0.69-1.03
D. melanogaster
genetic interaction
5.41
D. melanogaster
physical interaction
4.07
S. cerevisiae
genetic interaction
3.11
S. cerevisiae
physical interaction
3.34
* You can only specify one score for each feature. Therefore, in user-specified scoring, only presence/absence of a feature is considered, unlike the default scoring scheme that also considers feature values/details. For example, user-specified microarray scores are awarded when Pearson correlation >0.6 or meta genes co-express.
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